miRBase entry: hpo-mir-228

Stem-loop hpo-mir-228


Accession
MI0032686
Description
Heligmosomoides polygyrus hpo-mir-228 precursor miRNA


Sequence

AAUGGCACUGCAUGAAUUCACGGuuguuguuugggccGUGCAUCCAGUGGUUCCAUACC
.((((.(((((.((.((.(((((((........))))))).)).))))))).))))...

Structure
--A    C     A  A  U       guu 
   AUGG ACUGC UG AU CACGGuu   g
   |||| ||||| || || |||||||    
   UACC UGGUG AC UA GUGccgg   u
CCA    U     -  C  C       guu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
HpolyGenome23022012_contig_176574: 1579-1637 [-]

Database links

Mature hpo-miR-228-5p

Accession MIMAT0040458
Description Heligmosomoides polygyrus hpo-miR-228-5p mature miRNA
Sequence 1 - AAUGGCACUGCAUGAAUUCACGG - 23
Evidence experimental
Illumina [1]

Mature hpo-miR-228-3p

Accession MIMAT0040459
Description Heligmosomoides polygyrus hpo-miR-228-3p mature miRNA
Sequence 38 - GUGCAUCCAGUGGUUCCAUACC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488