miRBase entry: hpo-mir-1

Stem-loop hpo-mir-1


Accession
MI0032689
Description
Heligmosomoides polygyrus hpo-mir-1 precursor miRNA


Sequence

CGUGCUUCUUUGCAUGCCCAUAcuguauuuugauaUGGAAUGUAAAGAAGUAUGUA
(((((((((((((((..((((((........).))))).)))))))))))))))..

Structure
--               GC     - ugu 
  CGUGCUUCUUUGCAU  CCAUA c   a
  |||||||||||||||  ||||| |    
  GUAUGAAGAAAUGUA  GGUau g   u
AU               -A     a uuu 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_75276: 3656-3711 [-]

Database links

Mature hpo-miR-1-5p

Accession MIMAT0040464
Description Heligmosomoides polygyrus hpo-miR-1-5p mature miRNA
Sequence 1 - CGUGCUUCUUUGCAUGCCCAUA - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-1-3p

Accession MIMAT0040465
Description Heligmosomoides polygyrus hpo-miR-1-3p mature miRNA
Sequence 36 - UGGAAUGUAAAGAAGUAUGUA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488