miRBase entry: hpo-mir-34

Stem-loop hpo-mir-34


Accession
MI0032697
Description
Heligmosomoides polygyrus hpo-mir-34 precursor miRNA


Sequence

UGGCAGUGUGGUUAGCUGGUUGcagccggugacaACGGCUAUCAACACUGCCGUCC
.((((((((...(((((((((((.....)))))..))))))...))))))))....

Structure
---U        GGU      --     a 
    GGCAGUGU   UAGCUG  GUUGc g
    ||||||||   ||||||  ||||| c
    CCGUCACA   AUCGGC  cagug c
CCUG        ACU      Aa     g 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_4797: 563-618 [+]

Database links

Mature hpo-miR-34-5p

Accession MIMAT0040480
Description Heligmosomoides polygyrus hpo-miR-34-5p mature miRNA
Sequence 1 - UGGCAGUGUGGUUAGCUGGUUG - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-34-3p

Accession MIMAT0040481
Description Heligmosomoides polygyrus hpo-miR-34-3p mature miRNA
Sequence 35 - ACGGCUAUCAACACUGCCGUCC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488