Stem-loop hpo-mir-993

Accession

MI0032700

Description

Heligmosomoides polygyrus hpo-mir-993 precursor miRNA

Sequence

UACCUGCUAGUACGAGAUUGUUcgugugucgaaaUAAGCUCGUCGCUACAGGCAGA
..((((.(((((((((.(((((((.....)).))))).))))).))))))))....

Structure

--UA    C    -     A     -  u 
    CCUG UAGU ACGAG UUGUU cg g
    |||| |||| ||||| ||||| || u
    GGAC AUCG UGCUC AAUaa gc g
AGAC    -    C     G     a  u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_45589: 618-673 [-]

Mature hpo-miR-993-5p

• Accession: MIMAT0040486
• Description: Heligmosomoides polygyrus hpo-miR-993-5p mature miRNA
• Sequence: 1 - UACCUGCUAGUACGAGAUUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-993-3p

• Accession: MIMAT0040487
• Description: Heligmosomoides polygyrus hpo-miR-993-3p mature miRNA
• Sequence: 35 - UAAGCUCGUCGCUACAGGCAGA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488