Stem-loop hpo-mir-307

Accession

MI0032716

Description

Heligmosomoides polygyrus hpo-mir-307 precursor miRNA

Sequence

ccgugaacucCGCUUGCUCAGACGGUUGUUCGAUGuuuucugucaUCACAACCUCCUUGAGUAAGUCGAgcuaucguac
.((..(.(((.(((((((((((.((((((..((((........))))))))))))..))))))))).))).)..))...

Structure

--c  ug a   C         --  C      UC    uuu 
   cg  a cuc GCUUGCUCA  GA GGUUGU  GAUG   u
   ||  | ||| |||||||||  || ||||||  ||||    
   gc  u gAG UGAAUGAGU  CU CCAACA  CUac   c
cau  ua c   C         UC  -      --    ugu 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_12712: 6182-6260 [+]

Mature hpo-miR-307-5p

• Accession: MIMAT0040518
• Description: Heligmosomoides polygyrus hpo-miR-307-5p mature miRNA
• Sequence: 11 - CGCUUGCUCAGACGGUUGUUCGAUG - 35
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-307-3p

• Accession: MIMAT0040519
• Description: Heligmosomoides polygyrus hpo-miR-307-3p mature miRNA
• Sequence: 46 - UCACAACCUCCUUGAGUAAGUCGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488