miRBase entry: hpo-mir-232a

Stem-loop hpo-mir-232a

Accession

MI0032717

Description

Heligmosomoides polygyrus hpo-mir-232a precursor miRNA

Sequence

CCCGCAGUUGGCUGGAUUUGUCcauuaguggcgaUAAAUGCAUCUUAACUGCGGAGA
.((((((((((.((.((((((((.......).))))))).)).).)))))))))...

Structure

--C         - C  G       - au 
   CCGCAGUUG G UG AUUUGUC c  u
   ||||||||| | || ||||||| |  a
   GGCGUCAAU C AC UAAAUag g  g
AGA         U U  G       c gu

Annotation confidence Not enough data

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Genome context

HpolyGenome23022012_contig_45766: 4023-4079 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hpo-mir-232a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature hpo-miR-232a-5p

Accession	MIMAT0040520
Description	Heligmosomoides polygyrus hpo-miR-232a-5p mature miRNA
Sequence	1 - CCCGCAGUUGGCUGGAUUUGUC - 22
Evidence	experimental Illumina [1]

Mature hpo-miR-232a-3p

Accession	MIMAT0040521
Description	Heligmosomoides polygyrus hpo-miR-232a-3p mature miRNA
Sequence	35 - UAAAUGCAUCUUAACUGCGGAGA - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 25421927
Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
Nat Commun (2014) 5:5488