Stem-loop hpo-mir-5976

Accession

MI0032720

Description

Heligmosomoides polygyrus hpo-mir-5976 precursor miRNA

Sequence

UGGUCAAAUAUCACCGUCUACuagaagugaaugUAGAUUCGUGAUGUUGGACCGG
(((((.((((((((.((((((...........))))))..)))))))).))))).

Structure

-     A        -C      uaga 
 UGGUC AAUAUCAC  GUCUAC    a
 ||||| ||||||||  ||||||    g
 GCCAG UUGUAGUG  UAGAUg    u
G     G        CU      uaag 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_105770: 339-393 [-]

Mature hpo-miR-5976-5p

• Accession: MIMAT0040526
• Description: Heligmosomoides polygyrus hpo-miR-5976-5p mature miRNA
• Sequence: 1 - UGGUCAAAUAUCACCGUCUAC - 21
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-5976-3p

• Accession: MIMAT0040527
• Description: Heligmosomoides polygyrus hpo-miR-5976-3p mature miRNA
• Sequence: 34 - UAGAUUCGUGAUGUUGGACCGG - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488