Stem-loop hpo-mir-5896

Accession

MI0032721

Description

Heligmosomoides polygyrus hpo-mir-5896 precursor miRNA

Sequence

AUGGGCAAUGCACCCUGAUCAGAccgcuaugggaucUGGGCAGGGCGUUGUUCAAUA
.((((((((((..((((..((((((......)).))))..))))))))))))))...

Structure

--A          AC    AU    -  gc 
   UGGGCAAUGC  CCUG  CAGA cc  u
   ||||||||||  ||||  |||| ||   
   ACUUGUUGCG  GGAC  GUcu gg  a
AUA          --    GG    a  gu 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_158873: 338-394 [-]

Mature hpo-miR-5896-5p

• Accession: MIMAT0040528
• Description: Heligmosomoides polygyrus hpo-miR-5896-5p mature miRNA
• Sequence: 1 - AUGGGCAAUGCACCCUGAUCAGA - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-5896-3p

• Accession: MIMAT0040529
• Description: Heligmosomoides polygyrus hpo-miR-5896-3p mature miRNA
• Sequence: 37 - UGGGCAGGGCGUUGUUCAAUA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488