Stem-loop hpo-mir-10029

Accession

MI0032736

Description

Heligmosomoides polygyrus hpo-mir-10029 precursor miRNA

Sequence

uucuggggguGCCUCUACUGAACCUUGCAACcuucuugguucggUUGAAAGGUUAAGAGAGGCCAGAacugucgaag
(((.((.(((((((((.((.((((((.(((((..........))))).)))))).))))))))....))).))))).

Structure

-   u  g   ----      A  G      G     uucu 
 uuc gg ggu    GCCUCU CU AACCUU CAACc    u
 ||| || |||    |||||| || |||||| |||||     
 aag cu uca    CGGAGA GA UUGGAA GUUgg    g
g   -  g   AGAC      -  A      A     cuug 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_90656: 330-406 [+]

Mature hpo-miR-10029-5p

• Accession: MIMAT0040558
• Description: Heligmosomoides polygyrus hpo-miR-10029-5p mature miRNA
• Sequence: 11 - GCCUCUACUGAACCUUGCAAC - 31
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10029-3p

• Accession: MIMAT0040559
• Description: Heligmosomoides polygyrus hpo-miR-10029-3p mature miRNA
• Sequence: 45 - UUGAAAGGUUAAGAGAGGCCAGA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488