miRBase entry: hpo-mir-10036-1

Stem-loop hpo-mir-10036-1


Accession
MI0032753
Description
Heligmosomoides polygyrus hpo-mir-10036-1 precursor miRNA


Sequence

UACGGUAACCGUAGAACCCAUCgccauugcagaUGGCUUUCUUCGAUUACCGUGAC
((((((((.((.((((.(((((((....)).)))))..)))).)).))))))))..

Structure
--        C  U    -C     -  c 
  UACGGUAA CG AGAA  CCAUC gc a
  |||||||| || ||||  ||||| ||  
  GUGCCAUU GC UCUU  GGUag cg u
CA        A  U    UC     a  u 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_699: 1164-1219 [-]

Database links

Mature hpo-miR-10036-5p

Accession MIMAT0040591
Description Heligmosomoides polygyrus hpo-miR-10036-5p mature miRNA
Sequence 1 - UACGGUAACCGUAGAACCCAUC - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-10036-3p

Accession MIMAT0040592
Description Heligmosomoides polygyrus hpo-miR-10036-3p mature miRNA
Sequence 34 - UGGCUUUCUUCGAUUACCGUGAC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488