miRBase entry: hpo-mir-10040

Stem-loop hpo-mir-10040


Accession
MI0032759
Description
Heligmosomoides polygyrus hpo-mir-10040 precursor miRNA


Sequence

UGAAAGACAGCGACGAAGAAGAGcaaggaugcgacccUUCUGCGUCACCGUCCUUCAGC
((((.(((.(.((((.(((((.(((....)))....))))).)))).).))).))))..

Structure
--    A   A C    A     ---A   a 
  UGAA GAC G GACG AGAAG    Gca g
  |||| ||| | |||| |||||    |||  
  ACUU CUG C CUGC UCUUc    cgu g
CG    C   C A    G     ccag   a 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_108799: 1044-1102 [-]

Database links

Mature hpo-miR-10040-5p

Accession MIMAT0040602
Description Heligmosomoides polygyrus hpo-miR-10040-5p mature miRNA
Sequence 1 - UGAAAGACAGCGACGAAGAAGAG - 23
Evidence experimental
Illumina [1]

Mature hpo-miR-10040-3p

Accession MIMAT0040603
Description Heligmosomoides polygyrus hpo-miR-10040-3p mature miRNA
Sequence 38 - UUCUGCGUCACCGUCCUUCAGC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488