miRBase entry: hpo-mir-10041

Stem-loop hpo-mir-10041


Accession
MI0032760
Description
Heligmosomoides polygyrus hpo-mir-10041 precursor miRNA


Sequence

cucccacaugGUAGGUGAUUCUUGGCCGUUAUCcuuacccaccuggGUAACUCCAUGAUCUCCUUACAGuccggucugc
..((....((..(((.((((..(((..(((((((..........))))))).))).)))).)))..))....)).....

Structure
---cu  caca  GU   U    CU   CC       uuac 
     cc    ug  AGG GAUU  UGG  GUUAUCc    c
     ||    ||  ||| ||||  |||  |||||||     
     gg    AC  UCC CUAG  ACC  CAAUGgg    c
cgucu  ccuG  AU   U    -U   -U       ucca 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_136690: 2811-2889 [+]

Database links

Mature hpo-miR-10041-5p

Accession MIMAT0040604
Description Heligmosomoides polygyrus hpo-miR-10041-5p mature miRNA
Sequence 11 - GUAGGUGAUUCUUGGCCGUUAUC - 33
Evidence experimental
Illumina [1]

Mature hpo-miR-10041-3p

Accession MIMAT0040605
Description Heligmosomoides polygyrus hpo-miR-10041-3p mature miRNA
Sequence 47 - GUAACUCCAUGAUCUCCUUACAG - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488