miRBase entry: hpo-mir-10048

Stem-loop hpo-mir-10048


Accession
MI0032768
Description
Heligmosomoides polygyrus hpo-mir-10048 precursor miRNA


Sequence

ACAGGAUGUCUCGUGACAGGAcuuuucuaagauUCCUGUCCGUGCCACCUUGCGC
.((((.((.(.((.((((((((((....)))..))))))))).).)).))))...

Structure
--A    A  U U  U       --   u 
   CAGG UG C CG GACAGGA  cuu u
   |||| || | || |||||||  |||  
   GUUC AC G GC CUGUCCU  gaa c
CGC    C  C U  -       ua   u 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_155572: 2315-2369 [-]

Database links

Mature hpo-miR-10048-5p

Accession MIMAT0040620
Description Heligmosomoides polygyrus hpo-miR-10048-5p mature miRNA
Sequence 1 - ACAGGAUGUCUCGUGACAGGA - 21
Evidence experimental
Illumina [1]

Mature hpo-miR-10048-3p

Accession MIMAT0040621
Description Heligmosomoides polygyrus hpo-miR-10048-3p mature miRNA
Sequence 34 - UCCUGUCCGUGCCACCUUGCGC - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488