Stem-loop hpo-mir-10050

Accession

MI0032771

Description

Heligmosomoides polygyrus hpo-mir-10050 precursor miRNA

Sequence

GAAUAUUUCGAUUGCCGUGAGCGcuuuuugguccgacagagguucagcGAUGACGAGUUUGGAGAACGCAU
.....((((.(..(((((.(.(((((((((......)))))....)))).).))).)).).))))......

Structure

-GAAUA    G UU  -   G G    ----     gu 
      UUUC A  GC CGU A CGcu    uuuug  c
      |||| |  || ||| | ||||    |||||   
      AGAG U  UG GCA U Gcga    gagac  c
UACGCA    G -U  A   G A    cuug     ag 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_292449: 403-473 [-]

Mature hpo-miR-10050-5p

• Accession: MIMAT0040626
• Description: Heligmosomoides polygyrus hpo-miR-10050-5p mature miRNA
• Sequence: 1 - GAAUAUUUCGAUUGCCGUGAGCG - 23
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10050-3p

• Accession: MIMAT0040627
• Description: Heligmosomoides polygyrus hpo-miR-10050-3p mature miRNA
• Sequence: 49 - GAUGACGAGUUUGGAGAACGCAU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488