miRBase entry: hpo-mir-5932

Stem-loop hpo-mir-5932


Accession
MI0032778
Description
Heligmosomoides polygyrus hpo-mir-5932 precursor miRNA


Sequence

CUUCUAACCAUAGCCAAAAUCGgcgauacggcuugAUUUUGGUCGGUGGUUAGAGUCA
.((((((((((.((((((((((((......)).))))))))))..))))))))))...

Structure
--C          -A          -  ga 
   UUCUAACCAU  GCCAAAAUCG gc  u
   ||||||||||  |||||||||| ||   
   GAGAUUGGUG  UGGUUUUAgu cg  a
ACU          GC          u  gc 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_278211: 420-477 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from hpo-mir-5932
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hpo-miR-5932-5p

Accession MIMAT0040640
Description Heligmosomoides polygyrus hpo-miR-5932-5p mature miRNA
Sequence 1 - CUUCUAACCAUAGCCAAAAUCG - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-5932-3p

Accession MIMAT0040641
Description Heligmosomoides polygyrus hpo-miR-5932-3p mature miRNA
Sequence 36 - AUUUUGGUCGGUGGUUAGAGUCA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488