Stem-loop hpo-mir-5897

Accession

MI0032780

Description

Heligmosomoides polygyrus hpo-mir-5897 precursor miRNA

Sequence

UCCGGAUGCUUUGUACAAAGUCccacauugggaggUUUUGUAUACAGUAUCCGGAAG
((((((((((.((((((((((((((...)))))..))))))))).))))))))))..

Structure

--          U         --     c 
  UCCGGAUGCU UGUACAAAG  UCcca  
  |||||||||| |||||||||  ||||| a
  AGGCCUAUGA AUAUGUUUU  agggu  
GA          C         gg     u 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_149492: 798-854 [+]

Mature hpo-miR-5897-5p

• Accession: MIMAT0040644
• Description: Heligmosomoides polygyrus hpo-miR-5897-5p mature miRNA
• Sequence: 1 - UCCGGAUGCUUUGUACAAAGUC - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-5897-3p

• Accession: MIMAT0040645
• Description: Heligmosomoides polygyrus hpo-miR-5897-3p mature miRNA
• Sequence: 36 - UUUUGUAUACAGUAUCCGGAAG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488