miRBase entry: hpo-mir-10072b

Stem-loop hpo-mir-10072b


Accession
MI0032784
Description
Heligmosomoides polygyrus hpo-mir-10072b precursor miRNA


Sequence

UAUACUUCCCGCCUACGGAACGGcagcacgcuagucGUUCCGGGACGGGAAGUAUAAC
(((((((((((((..(((((((((((....)).))))))))))).)))))))))))..

Structure
--           -  UA         -  c 
  UAUACUUCCCG CC  CGGAACGGc ag a
  ||||||||||| ||  ||||||||| ||  
  AUAUGAAGGGC GG  GCCUUGcug uc c
CA           A  --         a  g 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_398700: 48-105 [-]

Database links

Mature hpo-miR-10072b-5p

Accession MIMAT0040652
Description Heligmosomoides polygyrus hpo-miR-10072b-5p mature miRNA
Sequence 1 - UAUACUUCCCGCCUACGGAACGG - 23
Evidence experimental
Illumina [1]

Mature hpo-miR-10072b-3p

Accession MIMAT0040653
Description Heligmosomoides polygyrus hpo-miR-10072b-3p mature miRNA
Sequence 37 - GUUCCGGGACGGGAAGUAUAAC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488