miRBase entry: hpo-mir-1822

Stem-loop hpo-mir-1822


Accession
MI0032793
Description
Heligmosomoides polygyrus hpo-mir-1822 precursor miRNA


Sequence

AGUUCAUCCCUGGGACGCUAUCGGguugugaaccGAGCUGCCCUAUGAUGGACUAU
((((((((...(((..((..((((........))))))..)))...))))))))..

Structure
--        CCU   AC  UA    guu 
  AGUUCAUC   GGG  GC  UCGG   g
  ||||||||   |||  ||  ||||    
  UCAGGUAG   CCC  CG  AGcc   u
UA        UAU   GU  --    aag 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_113376: 2168-2223 [-]

Database links

Mature hpo-miR-1822-5p

Accession MIMAT0040670
Description Heligmosomoides polygyrus hpo-miR-1822-5p mature miRNA
Sequence 1 - AGUUCAUCCCUGGGACGCUAUCGG - 24
Evidence experimental
Illumina [1]

Mature hpo-miR-1822-3p

Accession MIMAT0040671
Description Heligmosomoides polygyrus hpo-miR-1822-3p mature miRNA
Sequence 35 - GAGCUGCCCUAUGAUGGACUAU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488