Stem-loop hpo-mir-10064

Accession

MI0032796

Description

Heligmosomoides polygyrus hpo-mir-10064 precursor miRNA

Sequence

cucgccgcguUAUGGAAGCUGUCAAUAUCGAUCgugugcgccacgcaaUCGAUAUGGGUAGAUUUCAUAGCgccgcgccgc
..(((.(((((((((((.(((((.((((((((.(((((...))))).)))))))).))))).))))))))))).)))....

Structure

--cu   c           G     A        C     c 
    cgc gcguUAUGGAA CUGUC AUAUCGAU gugug  
    ||| ||||||||||| ||||| |||||||| ||||| g
    gcg cgCGAUACUUU GAUGG UAUAGCUa cgcac  
cgcc   c           A     G        a     c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_118398: 3862-3942 [+]

Mature hpo-miR-10064-5p

• Accession: MIMAT0040676
• Description: Heligmosomoides polygyrus hpo-miR-10064-5p mature miRNA
• Sequence: 11 - UAUGGAAGCUGUCAAUAUCGAUC - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10064-3p

• Accession: MIMAT0040677
• Description: Heligmosomoides polygyrus hpo-miR-10064-3p mature miRNA
• Sequence: 49 - UCGAUAUGGGUAGAUUUCAUAGC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488