miRBase entry: hpo-mir-10066

Stem-loop hpo-mir-10066


Accession
MI0032799
Description
Heligmosomoides polygyrus hpo-mir-10066 precursor miRNA


Sequence

uaaggacgguGUAGAUGUCGACAUGUGUAGUGGacguaccuuccaacaacGCGGAGUCGCACACGUAGCGCAGgauguccaag
...((((((((((..(((((((.(((((.(((((.......))).)).)))))..)))).)))..).))))....)))))...

Structure
uaa     ----    - GA   -    -A     A  -   cg 
   ggacg    guGU A  UGU CGAC  UGUGU GU GGa  u
   |||||    |||| |  ||| ||||  ||||| || |||  a
   ccugu    CGCG U  ACA GCUG  GCGca ca ccu  c
gaa     agGA    A GC   C    AG     a  a   uc 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_70050: 1264-1346 [+]

Database links

Mature hpo-miR-10066-5p

Accession MIMAT0040681
Description Heligmosomoides polygyrus hpo-miR-10066-5p mature miRNA
Sequence 11 - GUAGAUGUCGACAUGUGUAGUGG - 33
Evidence experimental
Illumina [1]

Mature hpo-miR-10066-3p

Accession MIMAT0040682
Description Heligmosomoides polygyrus hpo-miR-10066-3p mature miRNA
Sequence 51 - GCGGAGUCGCACACGUAGCGCAG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488