miRBase entry: hpo-mir-10098a

Stem-loop hpo-mir-10098a


Accession
MI0032812
Description
Heligmosomoides polygyrus hpo-mir-10098a precursor miRNA


Sequence

GGCGUGUCCACGAUCCAGUGCUGAccuuuaggaacagCCAUGGCUCGGCACCGCUAGA
((((.((.(.(((.(((..((((.((....))..))))..))).)))).))))))...

Structure
---    U  C A   U   GU    -A  u 
   GGCG GU C CGA CCA  GCUG  cc u
   |||| || | ||| |||  ||||  ||  
   UCGC CA G GCU GGU  Cgac  gg u
AGA    -  C -   C   AC    aa  a 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_69603: 99-156 [+]

Database links

Mature hpo-miR-10098a-5p

Accession MIMAT0040707
Description Heligmosomoides polygyrus hpo-miR-10098a-5p mature miRNA
Sequence 1 - GGCGUGUCCACGAUCCAGUGCUGA - 24
Evidence experimental
Illumina [1]

Mature hpo-miR-10098a-3p

Accession MIMAT0040708
Description Heligmosomoides polygyrus hpo-miR-10098a-3p mature miRNA
Sequence 38 - CCAUGGCUCGGCACCGCUAGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488