miRBase entry: hpo-mir-10082

Stem-loop hpo-mir-10082


Accession
MI0032821
Description
Heligmosomoides polygyrus hpo-mir-10082 precursor miRNA


Sequence

auauugccagGAGGAAGCUGGGAUUACGCAGcuacaaaguagcuCGUAUUCACUUCCUCAAcgacgcgauga
.((((((...(((((((.((((..((((.((((((...)))))))))))))))))))))......)))))).

Structure
a      ---cag       C    AU    C      a 
 uauugc      GAGGAAG UGGG  UACG AGcuac  
 ||||||      ||||||| ||||  |||| |||||| a
 guagcg      CUCCUUC ACUU  AUGC ucgaug  
a      cagcAA       -    --    -      a 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_4274: 433-504 [+]

Database links

Mature hpo-miR-10082-5p

Accession MIMAT0040725
Description Heligmosomoides polygyrus hpo-miR-10082-5p mature miRNA
Sequence 11 - GAGGAAGCUGGGAUUACGCAG - 31
Evidence experimental
Illumina [1]

Mature hpo-miR-10082-3p

Accession MIMAT0040726
Description Heligmosomoides polygyrus hpo-miR-10082-3p mature miRNA
Sequence 45 - CGUAUUCACUUCCUCAA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488