Stem-loop hpo-mir-10083

Accession

MI0032823

Description

Heligmosomoides polygyrus hpo-mir-10083 precursor miRNA

Sequence

uuguuugagccauCCUCGUUAUUACAUCGCUUGCUGUUucauauaCAGUAACGAUGGGUAGAGGUAgauagaaccc
..((((.......((((..((((.(((((.(((((((.......))))))))))))))))))))......))))..

Structure

uu    gagccau    GU    A     C       Uu 
  guuu       CCUC  UAUU CAUCG UUGCUGU  c
  ||||       ||||  |||| ||||| |||||||  a
  caag       GGAG  AUGG GUAGC AAUGACa  u
cc    -auagAU    --    -     -       ua 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_299959: 592-667 [+]

Mature hpo-miR-10083-??

• Accession: MIMAT0040729
• Description: Heligmosomoides polygyrus hpo-miR-10083-?? mature miRNA
• Sequence: 14 - CCUCGUUAUUACAUCGCUUGCUGUU - 38
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10083-3p

• Accession: MIMAT0040730
• Description: Heligmosomoides polygyrus hpo-miR-10083-3p mature miRNA
• Sequence: 46 - CAGUAACGAUGGGUAGAGGUA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488