Stem-loop hpo-mir-10084

Accession

MI0032824

Description

Heligmosomoides polygyrus hpo-mir-10084 precursor miRNA

Sequence

cuuccgcugcGAGAAUCUCUGGAGGAGGAGCGAugucuGUUCCUGCUCGAAGUUCUGCUGCagaggagcug
.((((.((((((((((.((..(((.(((((((.....))))))).))))).)))))..))))).))))...

Structure

--c    g     --     C  UG   G       A 
   uucc cugcG  AGAAU UC  GAG AGGAGCG u
   |||| |||||  ||||| ||  ||| ||||||| g
   gagg gaCGU  UCUUG AG  CUC UCCUUGu u
guc    a     CG     A  --   G       c 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_166786: 29-99 [-]

Mature hpo-miR-10084-5p

• Accession: MIMAT0040731
• Description: Heligmosomoides polygyrus hpo-miR-10084-5p mature miRNA
• Sequence: 11 - GAGAAUCUCUGGAGGAGGAGCGA - 33
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10084-3p

• Accession: MIMAT0040732
• Description: Heligmosomoides polygyrus hpo-miR-10084-3p mature miRNA
• Sequence: 39 - GUUCCUGCUCGAAGUUCUGCUGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488