Stem-loop hpo-mir-10086

Accession

MI0032826

Description

Heligmosomoides polygyrus hpo-mir-10086 precursor miRNA

Sequence

aaccgacaccGUUACCAAGCUACCUAACCGGGuggccagcccGUAUAGUAGUGGAAUGGAAGCGcuucccuugg
..((((...((((.(((..(((((((..(((((.....)))))..)))..))))..))).))))......))))

Structure

aa    ---cac    A   AG    --   AC     g 
  ccga      cGUU CCA  CUAC  CUA  CGGGu g
  ||||      |||| |||  ||||  |||  ||||| c
  gguu      GCGA GGU  GGUG  GAU  Gcccg c
--    cccuuc    A   AA    AU   AU     a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_11825: 104-177 [-]

Mature hpo-miR-10086-5p

• Accession: MIMAT0040735
• Description: Heligmosomoides polygyrus hpo-miR-10086-5p mature miRNA
• Sequence: 11 - GUUACCAAGCUACCUAACCGGG - 32
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10086-3p

• Accession: MIMAT0040736
• Description: Heligmosomoides polygyrus hpo-miR-10086-3p mature miRNA
• Sequence: 43 - GUAUAGUAGUGGAAUGGAAGCG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488