miRBase entry: hpo-mir-10101

Stem-loop hpo-mir-10101


Accession
MI0032846
Description
Heligmosomoides polygyrus hpo-mir-10101 precursor miRNA


Sequence

GAGGGAAGUCCACCAGUAAAGGcgggugcgccUUUACUGGUGGACUUCCCUCCCccucguuagu
((((((((((((((((((((((((....))))))))))))))))))))))))............

Structure
------------                        g 
            GAGGGAAGUCCACCAGUAAAGGcg g
            ||||||||||||||||||||||||  
            CUCCCUUCAGGUGGUCAUUUccgc u
ugauugcuccCC                        g 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_209412: 465-528 [-]

Database links

Mature hpo-miR-10101-5p

Accession MIMAT0040775
Description Heligmosomoides polygyrus hpo-miR-10101-5p mature miRNA
Sequence 1 - GAGGGAAGUCCACCAGUAAAGG - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-10101-3p

Accession MIMAT0040776
Description Heligmosomoides polygyrus hpo-miR-10101-3p mature miRNA
Sequence 33 - UUUACUGGUGGACUUCCCUCCC - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488