miRBase entry: hpo-mir-10043e

Stem-loop hpo-mir-10043e


Accession
MI0032850
Description
Heligmosomoides polygyrus hpo-mir-10043e precursor miRNA


Sequence

UAUUUCAUGAAGGUUGUCUUGUAcuucuauauaCAAGAACCCUUCUUGAUAAGC
....(((.(((((...(((((((........)))))))..))))).))).....

Structure
-UAUU   U     UUG       cuu 
     UCA GAAGG   UCUUGUA   c
     ||| |||||   |||||||    
     AGU CUUCC   AGAACau   u
CGAAU   U     -CA       aua 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_243269: 82-135 [-]

Database links

Mature hpo-miR-10043e-5p

Accession MIMAT0040783
Description Heligmosomoides polygyrus hpo-miR-10043e-5p mature miRNA
Sequence 1 - UAUUUCAUGAAGGUUGUCUUGUA - 23
Evidence experimental
Illumina [1]

Mature hpo-miR-10043e-3p

Accession MIMAT0040784
Description Heligmosomoides polygyrus hpo-miR-10043e-3p mature miRNA
Sequence 34 - CAAGAACCCUUCUUGAUAAGC - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488