miRBase entry: hpo-mir-5915

Stem-loop hpo-mir-5915


Accession
MI0032852
Description
Heligmosomoides polygyrus hpo-mir-5915 precursor miRNA


Sequence

UUAAGUAGUAACGCCAGUGUAAugacaugcgauuuACACUCGGCUCACUACUUAUGA
.((((((((...((((((((((...........))))))).)))..))))))))...

Structure
--U        AAC   -       ugac 
   UAAGUAGU   GCC AGUGUAA    a
   ||||||||   ||| |||||||    u
   AUUCAUCA   CGG UCACAuu    g
AGU        -CU   C       uagc 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_278355: 1292-1348 [+]

Database links

Mature hpo-miR-5915-5p

Accession MIMAT0040787
Description Heligmosomoides polygyrus hpo-miR-5915-5p mature miRNA
Sequence 1 - UUAAGUAGUAACGCCAGUGUAA - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-5915-3p

Accession MIMAT0040788
Description Heligmosomoides polygyrus hpo-miR-5915-3p mature miRNA
Sequence 36 - ACACUCGGCUCACUACUUAUGA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488