miRBase entry: hpo-mir-10124

Stem-loop hpo-mir-10124


Accession
MI0032872
Description
Heligmosomoides polygyrus hpo-mir-10124 precursor miRNA


Sequence

cucacccguuGAAGCAUACGAAGGCGGAACCUCuccgacucccacugcuucggggcguuGAAUAUCCCUUGCCGUAGACUGAagccggacgu
....((.(((..((..((((.(((.(((...((..((.(.(((........))))))..))...))))))..))))..))..))).))....

Structure
cuca  c   GA  CA    -A   C   ACC  uc  a u   acu 
    cc guu  AG  UACG  AGG GGA   UC  cg c ccc   g
    || |||  ||  ||||  ||| |||   ||  || | |||    
    gg cga  UC  AUGC  UUC CCU   AG  gc g ggg   c
ugca  c   AG  AG    CG   -   AUA  uu  - -   cuu 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_342533: 341-432 [+]

Database links

Mature hpo-miR-10124-5p

Accession MIMAT0040827
Description Heligmosomoides polygyrus hpo-miR-10124-5p mature miRNA
Sequence 11 - GAAGCAUACGAAGGCGGAACCUC - 33
Evidence experimental
Illumina [1]

Mature hpo-miR-10124-3p

Accession MIMAT0040828
Description Heligmosomoides polygyrus hpo-miR-10124-3p mature miRNA
Sequence 60 - GAAUAUCCCUUGCCGUAGACUGA - 82
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488