Stem-loop hpo-mir-10125

Accession

MI0032873

Description

Heligmosomoides polygyrus hpo-mir-10125 precursor miRNA

Sequence

uccgaguaggGUGGAAUCAGAGGGCUUCGGuacgccagaucuuauaaugagguacuagcGAGAGGUAUCGGUAUGAGCUACcuccuugaua
..((((..((((((..(((..(((((((....(((.((((((((...)))))).)).))).))))).))....))).)))))).))))...

Structure

-uc    ua      AA   --GA  -     GGua   c  -      u 
   cgag  ggGUGG  UCA    GG GCUUC    cgc ag aucuua  
   ||||  ||||||  |||    || |||||    ||| || |||||| a
   guuc  ucCAUC  AGU    CU UGGAG    Gcg uc uggagu  
aua    -c      -G   AUGG  A     ---A   a  a      a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_405927: 142-232 [+]

Mature hpo-miR-10125-5p

• Accession: MIMAT0040829
• Description: Heligmosomoides polygyrus hpo-miR-10125-5p mature miRNA
• Sequence: 11 - GUGGAAUCAGAGGGCUUCGG - 30
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10125-3p

• Accession: MIMAT0040830
• Description: Heligmosomoides polygyrus hpo-miR-10125-3p mature miRNA
• Sequence: 60 - GAGAGGUAUCGGUAUGAGCUAC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488