miRBase entry: hpo-mir-10135

Stem-loop hpo-mir-10135


Accession
MI0032883
Description
Heligmosomoides polygyrus hpo-mir-10135 precursor miRNA


Sequence

UGGGAUGCCGCCCGCUUGACGUgaccaaucguCAAGAGGCCGCGUCCCACCAGC
((((((((.(((..(((((((........))))))).))).)))))))).....

Structure
-----        C   CG       Uga 
     UGGGAUGC GCC  CUUGACG   c
     |||||||| |||  |||||||    
     ACCCUGCG CGG  GAACugc   c
CGACC        C   -A       uaa 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_279582: 173-226 [-]

Database links

Mature hpo-miR-10135-5p

Accession MIMAT0040848
Description Heligmosomoides polygyrus hpo-miR-10135-5p mature miRNA
Sequence 1 - UGGGAUGCCGCCCGCUUGACGU - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-10135-3p

Accession MIMAT0040849
Description Heligmosomoides polygyrus hpo-miR-10135-3p mature miRNA
Sequence 33 - CAAGAGGCCGCGUCCCACCAGC - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488