Stem-loop hpo-mir-10043f

Accession

MI0032905

Description

Heligmosomoides polygyrus hpo-mir-10043f precursor miRNA

Sequence

augcaguugcuugCGUAUUCAUGAUGAUUGCCCUGUgcuugaggccacAUGGACUCCUCAUGACUAGCAagucaaugca
.((((...((((((.((.((((((.((.(.((.((((((...)).)))).))).)).)))))).))))))))...))))

Structure

a    guu      G  U      U  U G  C    -  u 
 ugca   gcuugC UA UCAUGA GA U CC UGUg cu  
 ||||   |||||| || |||||| || | || |||| || g
 acgu   ugaACG AU AGUACU CU A GG Acac gg  
-    aac      -  C      C  C -  U    c  a 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_55329: 605-683 [-]

Mature hpo-miR-10043f-5p

• Accession: MIMAT0040892
• Description: Heligmosomoides polygyrus hpo-miR-10043f-5p mature miRNA
• Sequence: 14 - CGUAUUCAUGAUGAUUGCCCUGU - 36
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-10043f-3p

• Accession: MIMAT0040893
• Description: Heligmosomoides polygyrus hpo-miR-10043f-3p mature miRNA
• Sequence: 49 - AUGGACUCCUCAUGACUAGCA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488