miRBase entry: hpo-mir-2709

Stem-loop hpo-mir-2709


Accession
MI0032906
Description
Heligmosomoides polygyrus hpo-mir-2709 precursor miRNA


Sequence

UUAGUAAUUAGCUGUGAAGAUGAAuggcuugaguuuCUUUCACAGCUGAUUACUAAUU
(((((((((((((((((((..((((.......)))).)))))))))))))))))))..

Structure
--                   AU    gg 
  UUAGUAAUUAGCUGUGAAG  GAAu  c
  |||||||||||||||||||  ||||  u
  AAUCAUUAGUCGACACUUU  uuug  u
UU                   -C    ag 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_62569: 1124-1181 [-]

Database links

Mature hpo-miR-2709-5p

Accession MIMAT0040894
Description Heligmosomoides polygyrus hpo-miR-2709-5p mature miRNA
Sequence 1 - UUAGUAAUUAGCUGUGAAGAUGAA - 24
Evidence experimental
Illumina [1]

Mature hpo-miR-2709-3p

Accession MIMAT0040895
Description Heligmosomoides polygyrus hpo-miR-2709-3p mature miRNA
Sequence 37 - CUUUCACAGCUGAUUACUAAUU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488