miRBase entry: hpo-mir-10158b

Stem-loop hpo-mir-10158b


Accession
MI0032910
Description
Heligmosomoides polygyrus hpo-mir-10158b precursor miRNA


Sequence

aagcucaucgccUCCCAUCCGAUCGGCAGUCGACGccgagauaagcgGGGACGACGAGAUGGCCAGGcacccggcug
.((((....((((.(((((...(((...(((..(((........)))..)))..))))))))..))))....)))).

Structure
a    cauc    -C     CGA   GCA   GA   cga 
 agcu    gccU  CCAUC   UCG   GUC  CGc   g
 ||||    ||||  |||||   |||   |||  |||    
 ucgg    cGGA  GGUAG   AGC   CAG  gcg   a
g    ccca    CC     ---   -AG   GG   aau 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_96195: 282-358 [+]

Database links

Mature hpo-miR-10158b-5p

Accession MIMAT0040902
Description Heligmosomoides polygyrus hpo-miR-10158b-5p mature miRNA
Sequence 13 - UCCCAUCCGAUCGGCAGUCGACG - 35
Evidence experimental
Illumina [1]

Mature hpo-miR-10158b-3p

Accession MIMAT0040903
Description Heligmosomoides polygyrus hpo-miR-10158b-3p mature miRNA
Sequence 48 - GGGACGACGAGAUGGCCAGG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488