miRBase entry: gma-MIR10186a

Stem-loop gma-MIR10186a


Accession
MI0032951
Description
Glycine max gma-MIR10186a precursor miRNA


Sequence

uuuaguucuaaaauuuauauuuuaauaccuaaaaggucucuaucauucaaauucuuuaauuaacggaauuuaacaacaauaacuuuUUGGGAAUUAAAAUGUAAACUUcaauuacauu
.............(((((((((((((.((((((((((...........(((((((.........)))))))..........)))))))))).))))))))))))).............

Structure
uuuaguucuaaaa             a          cucuaucauuc       uua 
             uuuauauuuuaau ccuaaaaggu           aaauucu   a
             ||||||||||||| ||||||||||           |||||||   u
             AAAUGUAAAAUUA GGGUUuuuca           uuuaagg   u
uuacauuaacUUC             A          -auaacaacaa       caa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr10: 1434534-1434651 [+]

Database links

Mature gma-miR10186a

Accession MIMAT0040951
Description Glycine max gma-miR10186a mature miRNA
Sequence 87 - UUGGGAAUUAAAAUGUAAACUU - 108
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562

  2. PubMed ID: 25465409
    An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
    "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
    "Plant Cell (2014) 26:4584-4601