Stem-loop sfv-mir-S6

Accession

MI0032977

Description

Simian foamy virus sfv-mir-S6 precursor miRNA

Sequence

AGAUGUUUGGCUCACUGCGUUGGAcgacuggaaagaagcuuCAACAGUCGGGACAGCAUCUCG
(((((((.(.((((((..(((((((..((....))..).))))))))).))).))))))))..

Structure

--       U G   -   GC      - ga  g 
  AGAUGUU G CUC ACU  GUUGGA c  cu g
  ||||||| | ||| |||  |||||| |  ||  
  UCUACGA C GGG UGA  CAACuu g  ga a
GC       - A   C   --      c aa  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature sfv-miR-S6-5p

• Accession: MIMAT0040982
• Description: Simian foamy virus sfv-miR-S6-5p mature miRNA
• Sequence: 1 - AGAUGUUUGGCUCACUGCGUUGGA - 24
• Evidence: experimental ; Illumina [1]

Mature sfv-miR-S6-3p

• Accession: MIMAT0040983
• Description: Simian foamy virus sfv-miR-S6-3p mature miRNA
• Sequence: 42 - CAACAGUCGGGACAGCAUCUCG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24713319
   Noncanonical microRNA (miRNA) biogenesis gives rise to retroviral mimics of lymphoproliferative and immunosuppressive host miRNAs
   "Kincaid RP, Chen Y, Cox JE, Rethwilm A, Sullivan CS"
   "MBio (2014) 5:e00074