miRBase entry: vca-MIR10203

Stem-loop vca-MIR10203


Accession
MI0033000
Description
Vriesea carinata vca-MIR10203 precursor miRNA


Sequence

agcaccaaggccuUUGUGCUUUUAGAAGCAUUCCGGCccauuuuuauauGGAUCGGAAUGCUUCUAAUAGCACcaagccauuggugcu
(((((((((((.((.(((((.(((((((((((((((.((((......)))).))))))))))))))).))))).))))).))))))))

Structure
        -   c  U     U               C    uu 
agcaccaa ggc uU GUGCU UUAGAAGCAUUCCGG ccau  u
|||||||| ||| || ||||| ||||||||||||||| ||||   
ucgugguu ccg aa CACGA AAUCUUCGUAAGGCU GGua  u
        a   -  c     U               A    ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature vca-miR10203-5p

Accession MIMAT0041027
Description Vriesea carinata vca-miR10203-5p mature miRNA
Sequence 14 - UUGUGCUUUUAGAAGCAUUCCGGC - 37
Evidence experimental
Illumina [1]

Mature vca-miR10203-3p

Accession MIMAT0041028
Description Vriesea carinata vca-miR10203-3p mature miRNA
Sequence 50 - GGAUCGGAAUGCUUCUAAUAGCAC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23849128
    Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
    "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
    "Plant Sci (2013) 210:214-223