miRBase entry: vca-MIR1432

Stem-loop vca-MIR1432


Accession
MI0033011
Description
Vriesea carinata vca-MIR1432 precursor miRNA


Sequence

ccuuugUCAGGAGAGAUGACACCCAcaucggaggaccggguuaccguucggagugGGUGUCACCUCUCCUGGACauggg
(((.(((((((((((.((((((((((.(((((....(((....)))))))).)))))))))).))))))).)))).)))

Structure
   u    -       A          a     ggac   g 
ccu ugUC AGGAGAG UGACACCCAc ucgga    cgg u
||| |||| ||||||| |||||||||| |||||    |||  
ggg aCAG UCCUCUC ACUGUGGgug ggcuu    gcc u
   u    G       C          a     ----   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature vca-miR1432-5p

Accession MIMAT0041049
Description Vriesea carinata vca-miR1432-5p mature miRNA
Sequence 7 - UCAGGAGAGAUGACACCCA - 25
Evidence experimental
Illumina [1]

Mature vca-miR1432-3p

Accession MIMAT0041050
Description Vriesea carinata vca-miR1432-3p mature miRNA
Sequence 56 - GGUGUCACCUCUCCUGGAC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23849128
    Identification of potential miRNAs and their targets in Vriesea carinata (Poales, Bromeliaceae)
    "Guzman F, Almerao MP, Korbes AP, Christoff AP, Zanella CM, Bered F, Margis R"
    "Plant Sci (2013) 210:214-223