Stem-loop eun-MIR160

Accession

MI0033014

Description

Eugenia uniflora eun-MIR160 precursor miRNA

Literature search

1 open access papers mention eun-MIR160
(3 sentences)

Sequence

auauucgcguacguaugUGCCUGGCUCCCUGUAUGCCAugugcagagagcgcaucggagaaucgauggccuccgcggaugGCGUAUGAGGAGCCAAGCAUAuaaauuccccaguau
(((((.(.(....(((((((.(((((((.((((((((((.(((.(((.((.(((((......)))))))))).))).)))))))))).))))))).)))))))....).).)))))

Structure

     c c uacg       C       C          g   a   a  g     ga 
auauu g g    uaugUGC UGGCUCC UGUAUGCCAu ugc gag gc caucg  g
||||| | |    ||||||| ||||||| |||||||||| ||| ||| || |||||   
uauga c c    auAUACG ACCGAGG GUAUGCGgua gcg cuc cg guagc  a
     c c uuaa       A       A          g   c   -  -     ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature eun-miR160-5p

• Accession: MIMAT0041053
• Description: Eugenia uniflora eun-miR160-5p mature miRNA
• Sequence: 18 - UGCCUGGCUCCCUGUAUGCCA - 38
• Evidence: experimental ; Illumina [1]

Mature eun-miR160-3p

• Accession: MIMAT0041054
• Description: Eugenia uniflora eun-miR160-3p mature miRNA
• Sequence: 81 - GCGUAUGAGGAGCCAAGCAUA - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23166775
   Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis
   Guzman F, Almerão MP, Körbes AP, Loss-Morais G, Margis R
   PLoS One (2012) 7:e49811