miRBase entry: eun-MIR166

Stem-loop eun-MIR166


Accession
MI0033016
Description
Eugenia uniflora eun-MIR166 precursor miRNA

Literature search
1 open access papers mention eun-MIR166
(2 sentences)

Sequence

uuuuuugaggGGAAUGUUGUCUGGCUCGAGGccaccaucucagaucacccaucuucaucucgaugaaucaauuaagacccaucguuuuuuuuuuucuuuucuuuucuuuucuuuuguuguuguuguuguggguugggaucgacgcaaacccauuucagaugaucaugcggugaucgaucagaucauaugagcuugacgaccUCGGACCAGGCUUCAUUCCCCccaauu
....(((.((((((((..((((((.((((((.(..((.((((((((((((((..(((((((((((..((......))..)))))........................................(..((((((((.(.....).).)))))))..)))))))..))).)))))))............))))..))..).)))))).))))))..)))))))).)))..

Structure
uuuu   a        UU      C      c ac  -u    ------------       -   cu      cgaugaaucaauuaagacccaucguuuuuuuuuuucuuuucuuuucuuuucuuuuguuguuguu uu       - g a 
    uug ggGGAAUG  GUCUGG UCGAGG c  ca  cuca            gaucacc cau  ucaucu                                                                g  guggguu g g u
    ||| ||||||||  |||||| |||||| |  ||  ||||            ||||||| |||  ||||||                                                                |  ||||||| | | c
    aac CCCCUUAC  CGGACC GGCUcc g  gu  gagu            cuagugg gua  aguaga                                                                c  uacccaa c c g
--uu   c        UU      A      a ca  uc    auacuagacuag       c   cu      ---------------------------------------------------------------- uu       a g a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature eun-miR166-5p

Accession MIMAT0041057
Description Eugenia uniflora eun-miR166-5p mature miRNA
Sequence 11 - GGAAUGUUGUCUGGCUCGAGG - 31
Evidence experimental
Illumina [1]

Mature eun-miR166-3p

Accession MIMAT0041058
Description Eugenia uniflora eun-miR166-3p mature miRNA
Sequence 202 - UCGGACCAGGCUUCAUUCCCC - 222
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23166775
    Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis
    Guzman F, Almerão MP, Körbes AP, Loss-Morais G, Margis R
    PLoS One (2012) 7:e49811