Stem-loop eun-MIR167b

Accession

MI0033018

Description

Eugenia uniflora eun-MIR167b precursor miRNA

Literature search

1 open access papers mention eun-MIR167b
(6 sentences)

Sequence

gagagguUGAAGCUGCCAGCAUGAUCUGGuaauuaacugauaauucgaaaccuguuucucguuuuuguuccaucaauuuagucuuuccauuugaaauuauacuugcaaagucuggauuucuaagauaaucugucgauggauagcuugcauguuuuucgguugauuuggugaaguuugcacaaguccuugcuuuaagggucgguaagauucgaaucauaacgacucauuucgauccgauuuagugaacucgauucacacagucuauuacgcauaacaaagguauggcuaacuugguguaaaaagauuuuaacuuugguugaaucaagcaaagaugaacauauagcauccuaggcgucgcgaugcaaucacaucacaucucaaacggguuuuuacauacucccaagcuuccauaguuuugguuuuuucaaaaauacaucagaaugcauaucauguguguucuuuaaaguuucaaggguuucgauuuugacucacccaaacauacuuuuuaccuagcaagcuaggucaagaaacuucucccaaaauuagccacauuaagaugaauuauagggcgucauaucagccuuaUCAGGUCAUCUUGCAGCUUCAaucacucau
(((.((((((((((((.((.((((((((((((....((((((...((...(((((...(((((((((((((((((((((((.((((.((..............)).)))).))))))).....((((...)))))))))).(((......)))....(((((((((((.((((((((((........))).....(((((((...((.(((........))).))...)))))))((((..(((((.....)))))..))))............(((((.(((((....(((((((((((((...((((.(((((.(((...))).))))).))))......((((((........).))))).............(((....))))))))))).....)))))...))))).)))))(((((....))))).....((((((((((...))))))))))..(((((.....((((.(((....)))...))))......)))))..((((((....))))))....)))))))..)).))))))))))))..)))))))...))))).))...))))))..)))))))))))))).)))))))))))).)))..

Structure

--   a            C  C            uuaa      auu  aaa     uuc       --   uccaucaauuuagucuuuccauuugaaauuauacuugcaaagucuggauuucuaagauaaucugucgauggauagcuugcauguuuuuc         -  -u       -----------gcacaaguccuugcuuuaagggucgguaagauucgaaucauaacgacucauuucgauccgauuuagugaacucgauucacacagucuauuacgcauaa     g     cuaa     -----        gauuuuaacuuugguugaaucaagcaaagaugaacauauag 
  gag gguUGAAGCUGC AG AUGAUCUGGuaa    cugaua   cg   ccugu   ucguuuu  ugu                                                                                         gguugauuu gg  gaaguuu                                                                                                             caaag uaugg    cuugg     uguaaaaa                                         c
  ||| |||||||||||| || ||||||||||||    ||||||   ||   |||||   |||||||  |||                                                                                         ||||||||| ||  |||||||                                                                                                             ||||| |||||    |||||     ||||||||                                          
  cuc cuaACUUCGACG UC UACUGGACUauu    gacuau   gc   ggaua   aguagaa  aca                                                                                         ccgauuaaa cc  cuucaaa                                                                                                             guuuu auacc    gaacc     acauuuuu                                         a
ua   a            U  -            --cc      acu  --g     uua       uu   -----------------------------------------------------------------------------------------         a  cu       gaacuggaucgaacgauccauuuuucauacaaacccacucaguuuuagcuuugggaacuuugaaauuucuuguguguacuauacguaagacuacauaaaaacuuuuuug     g     -uuc     cucau        gggcaaacucuacacuacacuaacguagcgcugcggauccu 

Annotation confidence Not enough data

Genome context

Unknown

Mature eun-miR167b-5p

• Accession: MIMAT0041061
• Description: Eugenia uniflora eun-miR167b-5p mature miRNA
• Sequence: 8 - UGAAGCUGCCAGCAUGAUCUGG - 29
• Evidence: experimental ; Illumina [1]

Mature eun-miR167b-3p

• Accession: MIMAT0041062
• Description: Eugenia uniflora eun-miR167b-3p mature miRNA
• Sequence: 586 - UCAGGUCAUCUUGCAGCUUCA - 606
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23166775
   Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis
   Guzman F, Almerão MP, Körbes AP, Loss-Morais G, Margis R
   PLoS One (2012) 7:e49811