miRBase entry: eun-MIR172a

Stem-loop eun-MIR172a


Accession
MI0033021
Description
Eugenia uniflora eun-MIR172a precursor miRNA


Sequence

cguuugCAGGUGUAGCAUCAUCAAGAUucacaggcaaaaauggaccucagugauuggaucgcccuuugccgaaaguccaucggagauugAGAAUCUUGAUGAUGCUGCAUcggcaauagacg
(..((((.(((((((((((((((((((((.(((......((((((.((.((((..((....))..)))).))..))))))......))).))))))))))))))))))))).))))..)...

Structure
--- gu    A                     a   gcaaaa      -c  a    uu  a 
   c  uugC GGUGUAGCAUCAUCAAGAUuc cag      auggac  uc guga  gg u
   |  |||| ||||||||||||||||||||| |||      ||||||  || ||||  ||  
   g  aacg cUACGUCGUAGUAGUUCUAAG guu      uaccug  ag cguu  cc c
gca au    g                     A   agaggc      aa  c    uc  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature eun-miR172a-5p

Accession MIMAT0041066
Description Eugenia uniflora eun-miR172a-5p mature miRNA
Sequence 7 - CAGGUGUAGCAUCAUCAAGAU - 27
Evidence experimental
Illumina [1]

Mature eun-miR172a-3p

Accession MIMAT0041067
Description Eugenia uniflora eun-miR172a-3p mature miRNA
Sequence 90 - AGAAUCUUGAUGAUGCUGCAU - 110
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23166775
    Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis
    Guzman F, Almerão MP, Körbes AP, Loss-Morais G, Margis R
    PLoS One (2012) 7:e49811