Stem-loop eun-MIR10211a

Accession

MI0033036

Description

Eugenia uniflora eun-MIR10211a precursor miRNA

Sequence

ggacggacgggugagauagaccauccaccuggcgaauucggagcguaaguugccgcuaucuuccucucuccgacucucguucaaaucuucaucccuggcugggucgggcucgauuuuggacggaggagaaugguagucaaagaucgguugucgcgaccgaaccuaguaguagaagaagagggggagaggagagaggcagcuuaguggagugggggcgagugggcgaggcgcacuggguuaaugagggggugaaggcgugggaUCGGCUGUCAAUUUCUGGAUUucaguucgaaauggaaagagccgauaaugcaaagggaagacguggggacugcugucaauuucuggauuucuugcuugauucuccggcauguuuuucggcaucaugucgauuccagaacacgcaaaauuagcgagggaaccaaauugcacgacccagacaacuucgcacaaaauagggcauuaccccaguucgcgcuucgccugccucacccaaucaccccacuccacucagcuggcuaucuccauuucgaacugaaAUCCAGAAAUUGGCAGCCGUUccccugccuucgccucgcauuaacccgguucguaaaucgccugccucgcccacuugccccacuccacuaagcugccucucuuuccucucccccuguucuucugcuaccagaaaagcucgguccuuucaccgucggcuacuauucuccuccguucaagcccaagaccgagcucaagccaggaugaggauuggacgagagauagcagcaacuuacccuccgaacucgccggguggauggucuaccucacuugggugggguug
...((..((((((((.(((((((((((((((((((.(((((((.(((((((((.((((((..............((((((((((.(((((((((.((((((((((((.((.(..((((((((((((((((((((((((...((.((((.(....((((((.(((.((((((((((((.((((((((((((((((((((((((((((((((((((.((((((((((((((((((((((((((((..((((((((((((.((((.(((((((((((((((((((((((((((((((((((...(((((.....((..(((((....((((((.(((.((((((((..(((.(((((((((.((((.....((.((((((((((((...))))))....)))))).))..))))))))))))).)))))))).)))...)))..................(((.....)))(((...(((...)))))).............))))))))).))..)))))))...))))))))))))))))))))))))))))))))))).)))).)))))))))))).)))))))))))).........))..))))))))))))))))))))))))))))))))))))))..)))))))))))).)))))))))))).))....).))))))....)))))))))))))))))))))))))))))))..).)).)))).))).)))))))))))))))))))))))))))))).))))))))).))))))).))))))))))))))))))).))))))))..))......

Structure

---gga  ga        a                   a       c         c      uuccucucuccgac          a         c     -   -    g  c au                        aaa  u    u ucgc      a ----  a            g            --                        g              --  ---------            ag            u    U                                   aag     auaau  aa  -   agac      -----------------------------------------------------------a   --c   -     uc   a         u    cuccg  a      ----      u 
      cg  cgggugag uagaccauccaccuggcga uucggag guaaguugc gcuauc              ucucguucaa ucuucaucc uggcu ggg ucgg cu g  uuuggacggaggagaaugguaguc   ga cggu g    gaccga c    cu guaguagaagaa agggggagagga  gagaggcagcuuaguggagugggg cgagugggcgaggc  gc         acuggguuaaug  ggggugaaggcg ggga CGGCUGUCAAUUUCUGGAUUucaguucgaaaugga   agccg     gc  ag gga    gugggg                                                            cug   ugu caauu  ugg uuucuugcu gauu     gc uguuuu    ucggca  
      ||  |||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||              |||||||||| ||||||||| ||||| ||| |||| || |  ||||||||||||||||||||||||   || |||| |    |||||| |    || |||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||||||||||||  ||         ||||||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||||   |||||     ||  || |||    ||||||                                                            |||   ||| |||||  ||| ||||||||| ||||     || ||||||    |||||| c
      gu  guucacuc aucugguaggugggccgcu aagccuc cauucaacg cgauag              agagcagguu aggaguagg accga cuc agcc ga c  gaacuugccuccucuuaucaucgg   cu gcca c    cuggcu g    ga caucgucuucuu ucccccucuccu  cucuccgucgaaucaccucacccc guucacccgcuccg  cg         uggcccaauuac  cuccgcuuccgu cccU GCCGACGGUUAAAGACCUAaagucaagcuuuaccu   ucggu     cg  uc ccu    cacccc                                                            gac   gca guuaa  acc agggagcga uuaa     cg acaaga    agcugu  
guuggg  gg        c                   c       c         a      --------------          -         -     a   g    a  a cc                        ---  -    - uuuc      c aaaa  c            g            uu                        -              uc  cuaaaugcu            -g            c    U                                   cua     -----  ac  a   ----      acuaacccacuccguccgcuucgcgcuugaccccauuacgggauaaaacacgcuucaaca   cca   c     --   a         -    ---aa  c      ccuu      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature eun-miR10211a-5p

• Accession: MIMAT0041096
• Description: Eugenia uniflora eun-miR10211a-5p mature miRNA
• Sequence: 263 - UCGGCUGUCAAUUUCUGGAUU - 283
• Evidence: experimental ; Illumina [1]

Mature eun-miR10211a-3p

• Accession: MIMAT0041097
• Description: Eugenia uniflora eun-miR10211a-3p mature miRNA
• Sequence: 540 - AUCCAGAAAUUGGCAGCCGUU - 560
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23166775
   Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis
   Guzman F, Almerão MP, Körbes AP, Loss-Morais G, Margis R
   PLoS One (2012) 7:e49811