Stem-loop eun-MIR10211b

Accession

MI0033037

Description

Eugenia uniflora eun-MIR10211b precursor miRNA

Sequence

caaccccacccaagugagguagaccauccacccggcgaguucggaggguaaguugcugcuaucucucguccaauccucauccuggcuugagcucggucuugggcuugaacggaggagaauaguagccgacggugaaaggaccgagcuuuucugguagcagaagaacagggggagaggaaagagaggcagcuuaguggaguggggcaagugggcgaggcaggcgauuuacgaaccggguuaaugcgaggcgaaggcaggggaacggcugcCAAUUUCUGGAUUUCAGUUCGaaauggagauagccagcugaguggaguggggugauugggugaggcaggcgaagcgcgaacugggguaaugcccuauuuugugcgaaguugucugggucgugcaauuugguucccucgcuaauuuugcguguucuggaaucgacaugaugccgaaaaacaugccggagaaucaagcaagaaauccagaaauugacagcaguccccacgucuucccuuugcauuaucggcucuuuccauuUCGAACUGAAAUCCAGAAAUUgacagccgaucccacgccuucacccccucauuaacccagugcgccucgcccacucgcccccacuccacuaagcugccucucuccucucccccucuucuucuacuacuagguucggucgcgacaaccgaucuuugacuaccauucuccuccguccaaaaucgagcccgacccagccagggaugaagauuugaacgagagucggagagaggaagauagcggcaacuuacgcuccgaauucgccagguggauggucuaucucacccguccgucc
.............(((((((((((((((((((.(((((((((((((.(((((((((((((((((.((.((...((((((((((((((.(.....((((..((((((((((((((((((((.(((((.((((((....(((((((((....(((((((.(((((((.((((((((((((..(((((((((((((((((((((((((.((((((((((((..((.........((.(((((((((.(.((.((((((..((((.((((((.((((((((((((((((((((((((((((((.((((.....((((.((.((((.(((((((.((.((.(((...(((((((.((((((...)))))).)))))))...))).(((((((..(((...(((((((((...........(((((((.(((.(((.....))).)))...))))))).)).))))))))))....)))))))........))..)))))).))).)))).)).))))...)))).)))))))))))))))))))))))))))))).)))))).))))..)))))).))..).))))))))).)))))))))))))))).).)))))))))))))))))))))))))))))))))))).))))))).))))))))))))))).)....)))).))...).)))).))))))))))))......)))))))))))))))))).)))))).(((((......))))))))..)).))))))))))))))))))).))))))))))))).)))))))))))))))))))..........

Structure

caaccccacccaa                   c             g                 c  g  caa   -----------------      -     u agcuc    uu        ------            a    - --c  -    gaaa -        uuuu       c       c            aa                        - a            ag  gauuuacga  c         c -a  c      ag    a      c                              u    agcug    g  u    u   -    u  -g  aggcgaagcgcgaacugggguaaugcccuauuuugugcgaaguug       --cg   aau       -  ucgcuaauuuu       --c   a   g 
             gugagguagaccauccacc ggcgaguucggag guaaguugcugcuaucu uc uc   ucc                 ucaucc uggcu g     gguc  gggcuuga      acggaggagaau guag c   ga cggu    g gaccgagc    cugguag agaagaa agggggagagga  gagaggcagcuuaguggagugggg c agugggcgaggc  gc         ac ggguuaaug g  gg gaaggc  ggga cggcug CAAUUUCUGGAUUUCAGUUCGaaauggaga agcc     agug ag gggg gau uggg ga  gc                                             ucugggu    ugc   uugguuc cc           gcguguu   ugg auc a
             ||||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||   |||                 |||||| ||||| |     ||||  ||||||||      |||||||||||| |||| |   || ||||    | ||||||||    ||||||| ||||||| ||||||||||||  |||||||||||||||||||||||| | ||||||||||||  ||         || ||||||||| |  || ||||||  |||| |||||| |||||||||||||||||||||||||||||| ||||     |||| || |||| ||| |||| ||  ||                                             |||||||    |||   ||||||| ||           |||||||   ||| ||| c
             cacucuaucugguaggugg ccgcuuaagccuc cauucaacggcgauaga ag ag   agg                 aguagg accga c     ccag  cccgagcu      ugccuccucuua cauc g   cu gcca    c cuggcuug    gaucauc ucuucuu ucccccucuccu  cucuccgucgaaucaccucacccc g ucacccgcuccg  cg         ug cccaauuac c  cc cuuccg  cccu gccgac gUUAAAGACCUAAAGUCAAGCUuuaccuuu ucgg     uuac uu cccu cug accc cu  cg                                             agaccua    acg   aacuaag gg           cguacaa   gcc uag a
---ccugccugcc                   a             g                 -  g  -ag   cugagagcaaguuuaga      g     - -----    --        aaaacc            c    a uuu  a    acag g        ----       a       c            --                        c c            --  ---------  a         u cc  a      ca    a      a                              c    --cua    g  u    u   c    -  ga  -------------------------------------acaguuaa       aaga   ---       a  ----------c       aaa   g   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature eun-miR10211b-5p

• Accession: MIMAT0041098
• Description: Eugenia uniflora eun-miR10211b-5p mature miRNA
• Sequence: 270 - CAAUUUCUGGAUUUCAGUUCG - 290
• Evidence: experimental ; Illumina [1]

Mature eun-miR10211b-3p

• Accession: MIMAT0041099
• Description: Eugenia uniflora eun-miR10211b-3p mature miRNA
• Sequence: 529 - UCGAACUGAAAUCCAGAAAUU - 549
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23166775
   Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis
   Guzman F, Almerão MP, Körbes AP, Loss-Morais G, Margis R
   PLoS One (2012) 7:e49811