Stem-loop eun-MIR10220

Accession

MI0033047

Description

Eugenia uniflora eun-MIR10220 precursor miRNA

Sequence

gguuugcccauucgucgggcgauuucuucgcuuuguccagacUGCUGUUCUUCCGUUCACGAAUcaugugccgauccaauccaagagauucgaaccuaccuccguccagagcagacucccaccugcucgacgaugucccacaaccacgguagugcaauuucuaugcccauuuuugacucucugaucaaauuauuaucagucguugccgacguaauucggagcaaacguaagaguguacugaggaugaagguaguguugaaucucuuagaguugguuccugaagcgauUCGUGAAGGAAGAAUGUGCAAUcgggacaaccgacgaagucgcccgacguaaugugcuugacu
((((.((.((((((((((((((((((.(((..((((((.((.((((((((((((.((((((((((.(.....((.(((((.((((((((((.(((((((((.(((((..((.(.((((..((.(((((((..(((((...((((.(((((((((((.......))).....((((((.....).)))))..)))))).)).))))..)))))...)).)))))...))..)))).).))..))))).)))))).)))))))))))).).))))).)).....).))))))))))))))))))).))).)).)))))).))).)))))))))))))).)))).))..))))

Structure

    -u  c    -              u   cu      a  c   -         G          a gugcc  u     c -         g   -      c     ag  c g    cc  --c     -  -cg     cca    c  -      gcaauuucuaugcccauu     - u 
gguu  gc cauu cgucgggcgauuuc ucg  uugucc ga UGC UGUUCUUCC UUCACGAAUc u     ga ccaau c aagagauuc aac cuaccu cgucc  ag a acuc  ac   ugcuc ga   auguc   caac ac gguagu                  uuuga c c
||||  || |||| |||||||||||||| |||  |||||| || ||| ||||||||| |||||||||| |     || ||||| | ||||||||| ||| |||||| |||||  || | ||||  ||   ||||| ||   |||||   |||| || ||||||                  ||||| | u
ucag  cg guaa gcagcccgcugaag agc  aacagg cU ACG GUAAGAAGG AAGUGCUuag g     cu gguug g uucucuaag uug gaugga guagg  uc u ugag  ug   acgag cu   ugcag   guug ug cuauua                  aaacu g c
    uu  u    u              c   -c      g  A   U         -          c aaguc  u     a a         -   u      a     ag  a g    aa  caa     g  uaa     -cc    c  a      ----------------uu     a u 

Annotation confidence Not enough data

Genome context

Unknown

Mature eun-miR10220-5p

• Accession: MIMAT0041116
• Description: Eugenia uniflora eun-miR10220-5p mature miRNA
• Sequence: 43 - UGCUGUUCUUCCGUUCACGAAU - 64
• Evidence: experimental ; Illumina [1]

Mature eun-miR10220-3p

• Accession: MIMAT0041117
• Description: Eugenia uniflora eun-miR10220-3p mature miRNA
• Sequence: 288 - UCGUGAAGGAAGAAUGUGCAAU - 309
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23166775
   Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis
   Guzman F, Almerão MP, Körbes AP, Loss-Morais G, Margis R
   PLoS One (2012) 7:e49811