miRBase entry: eun-MIR10221

Stem-loop eun-MIR10221


Accession
MI0033048
Description
Eugenia uniflora eun-MIR10221 precursor miRNA


Sequence

acuuggagauaucgaGCUCGAGGUCAGUUUGUCGCCaaacaaacgugacacagagcgugauucuuauuuuugcgaggcuuugagguuaggcuuugagcuuaccuucuucucccgucgaaaacccuagccgcaaacccccgcagagguaauagucgcgcucugccauguuucgCGGCAAACUGGACCUCGAGAUCcaucacuccaagu
((((((((..((.((.(((((((((((((((((((.....(((((((...((((((((((((.(((((((((((.((.((((.(((((((.(((((..................)))))...))))))).)))).)).))))))))))).)))))))))))).))))))).)))))))))).))))))))).)).))..))))))))

Structure
        au  c  G         -          Caaac       aca            c           a  c    a       --c     gcuuaccu 
acuuggag  au ga CUCGAGGUC AGUUUGUCGC     aaacgug   cagagcgugauu uuauuuuugcg gg uuug gguuagg   uuuga        u
||||||||  || || ||||||||| ||||||||||     |||||||   |||||||||||| ||||||||||| || |||| |||||||   |||||         
ugaaccuc  ua CU GAGCUCCAG UCAAACGGCg     uuuguac   gucucgcgcuga aauggagacgc cc aaac ccgaucc   aagcu        c
        ac  c  A         G          ----c       --c            u           c  c    g       caa     gcccucuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature eun-miR10221-5p

Accession MIMAT0041118
Description Eugenia uniflora eun-miR10221-5p mature miRNA
Sequence 16 - GCUCGAGGUCAGUUUGUCGCC - 36
Evidence experimental
Illumina [1]

Mature eun-miR10221-3p

Accession MIMAT0041119
Description Eugenia uniflora eun-miR10221-3p mature miRNA
Sequence 173 - CGGCAAACUGGACCUCGAGAUC - 194
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23166775
    Identification of microRNAs from Eugenia uniflora by high-throughput sequencing and bioinformatics analysis
    Guzman F, Almerão MP, Körbes AP, Loss-Morais G, Margis R
    PLoS One (2012) 7:e49811