Stem-loop prv-mir-LLT12

Accession

MI0033053

Description

Pseudorabies virus prv-mir-LLT12 precursor miRNA

Sequence

gugugugugcgacggaacgggccgcagaggaucgggauguaugcacggucguccccgucUCAAACUUCCUCGUGUCCCCuguuccccauccuuccacccaugc
(((((.(((.((.(((..(((..((((.(((((((((.((.((.((((......))))..)).)).))).)).)))).))))..))).))).))))).)))))

Structure

     u   c  c   ac   cc    a    -  -   u  a  -c    uc 
gugug gug ga gga  ggg  gcag ggau cg gga gu ug  acgg  g
||||| ||| || |||  |||  |||| |||| || ||| || ||  ||||   
cguac cac cu ccu  ccc  uguC CCUG GC CCU CA AC  ugcc  u
     c   -  u   -a   cu    C    U  U   U  A  Uc    cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature prv-miR-LLT12

• Accession: MIMAT0041125
• Description: Pseudorabies virus prv-miR-LLT12 mature miRNA
• Sequence: 60 - UCAAACUUCCUCGUGUCCCC - 79
• Evidence: experimental ; Ion-Torrent [1]

References

1. PubMed ID: 24475202
   The role of viral and host microRNAs in the Aujeszky's disease virus during the infection process
   Timoneda O, Núñez-Hernández F, Balcells I, Muñoz M, Castelló A, Vera G, Pérez LJ, Egea R, Mir G, Córdoba S, Rosell R, Segalés J, Tomàs A, Sánchez A, Núñez JI
   PLoS One (2014) 9:e86965