miRBase entry: cgr-mir-194-2

Stem-loop cgr-mir-194-2


Accession
MI0033062
Description
Cricetulus griseus cgr-mir-194-2 precursor miRNA


Sequence

30779 reads, 495 reads per million, 6 experiments
uggcugccacccccuguaacagcaacuccauguggaagugcccacuaguuCCAGUGGGGCUGCUGUUAUCUGggguggaggcugg
.((((.(((((((..(((((((((.((((((.(((((.((.....)).))))))))))).)))))))))..))))))).))))..

Structure
-u    g       cu         a      g     g  c 
  ggcu ccacccc  guaacagca cuccau uggaa ug c
  |||| |||||||  ||||||||| |||||| ||||| || c
  ucgg ggugggG  UAUUGUCGU GGGGUG ACCuu au a
gg    a       UC         C      -     g  c 


Annotation confidence Low
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Genome context
JH001367.1: 289932-290016 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cgr-mir-194-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cgr-miR-194-2

Accession MIMAT0041134
Description Cricetulus griseus cgr-miR-194-2 mature miRNA
Sequence 51 - CCAGUGGGGCUGCUGUUAUCUG - 72
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493