miRBase entry: cgr-mir-301b

Stem-loop cgr-mir-301b


Accession
MI0033066
Description
Cricetulus griseus cgr-mir-301b precursor miRNA


Sequence

2465 reads, 36 reads per million, 6 experiments
gcugcaggugcucugacuagguugcacuacugugcucugagaagCAGUGCAAUGAUAUUGUCAAAGCaucugggacca
..(.((((((((.((((...((((((((.((...........)).))))))))......)))).)))))))).)....

Structure
--gc g        c    ---uag        a  gugc 
    u caggugcu ugac      guugcacu cu    u
    | |||||||| ||||      |||||||| ||    c
    g gucuaCGA ACUG      UAACGUGA ga    u
acca g        A    UUAUAG        C  agag 


Annotation confidence Not enough data
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Genome context
JH000340.1: 1047159-1047236 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cgr-mir-301b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cgr-miR-301b

Accession MIMAT0041138
Description Cricetulus griseus cgr-miR-301b mature miRNA
Sequence 45 - CAGUGCAAUGAUAUUGUCAAAGC - 67
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493