miRBase entry: cgr-mir-449a

Stem-loop cgr-mir-449a


Accession
MI0033069
Description
Cricetulus griseus cgr-mir-449a precursor miRNA


Sequence

5546 reads, 71 reads per million, 6 experiments
cugugugugacggguUGGCAGUGUAUUGUUAGCUGGUugaauaugugaaaggcaccagcuaacaugcaacugcuauccugucgcacauaca
.(((((((((((((.(((((((((((.((((((((((.(..(.......)..))))))))))))))).))))))).)))))))))))))..

Structure
-c             u       -    U          u aa au 
  ugugugugacggg UGGCAGU GUAU GUUAGCUGGU g  u  g
  ||||||||||||| ||||||| |||| |||||||||| |  |  u
  auacacgcugucc aucguca cgua caaucgacca c  a  g
ac             u       a    -          - gg aa 


Annotation confidence Low
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Genome context
JH001768.1: 250492-250582 [-]

Database links

Mature cgr-miR-449a

Accession MIMAT0041140
Description Cricetulus griseus cgr-miR-449a mature miRNA
Sequence 16 - UGGCAGUGUAUUGUUAGCUGGU - 37
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493